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PUBLICATIONS

  1. Omid Haji Maghsoudi, A. Vahedipour, T. Hallowel, A. Spence. "Open-source Python software for analysis of 3D kinematics from quadrupedal animals," Journal of Signal Processing and Systems, 51, (2019).

  2. Omid Haji Maghsoudi, A. Vahedipour, A Spence. "Three‐dimensional‐based landmark tracker employing a superpixels method for neuroscience, biomechanics, and biology studies," International Journal of Imaging Systems and Technology, (2019).  

  3. Omid Haji Maghsoudi, A. Vahedipour, J. Gerstenhaber, S. Philip George, T. Hallowell, B. Robertson, M. Short, and A. Spence. "Matlab software for impedance spectroscopy designed for neuroscience applications." Journal of Neuroscience Methods 307 (2018): 70-83.

  4. Vahedipour, Omid Haji Maghsoudi, S. Wilshin, P. Shamble, B. Robertson, and A. Spence. "Uncovering the structure of the mouse gait controller: Mice respond to substrate perturbations with adaptations in gait on a continuum between trot and bound." Journal of Biomechanics 78 (2018): 77-86.

  5. Omid Haji Maghsoudi, A. Vahedipour Tabrizi, B. Robertson, A. Spence. “Application of superpixels to segment several landmarks in running rodents.” Journal of Pattern Recognition and Image Analysis 28 (2018): 468-482.

  6. Omid Haji Maghsoudi. "Superpixel based segmentation and classification of polyps in wireless capsule endoscopy."IEEE Symposium on Signal Processing in Medicine and Biology (SPMB), pp. 1-4. IEEE, 2017.

  7. Omid Haji Maghsoudi, A. Vahedipour Tabrizi, B. Robertson, A. Spence. "3D modeling of running rodents based on direct linear transform." IEEE Symposium on Signal Processing in Medicine and Biology (SPMB), pp. 1-4. IEEE, 2017.

  8. Omid Haji Maghsoudi, T. Hallowell, A. Vahedipour Tabrizi, S. Philip George, B. Robertson, M. Short, J. Gerstenhaber, A. Spence. "Impedance characterization of bipolar implantable nerve cuffs for neuroscience applications." IEEE Symposium on Signal Processing in Medicine and Biology (SPMB), pp. 1-3. IEEE, 2017.

  9. Omid Haji Maghsoudi, A. Vahedipour Tabrizi, B. Robertson, A. Spence, "Superpixels based marker tracking vs. hue thresholding in rodent biomechanics application."51st Asilomar Conference on Signals, Systems, and Computers, pp. 209-213. IEEE, 2017.

  10. R. Penjweini, S. Deville, Omid Haji Maghsoudi, K. Notelaers, A. Ethirajan, and M. Ameloot. "Investigating the effect of poly‐l‐lactic acid nanoparticles carrying hypericin on the flow‐biased diffusive motion of HeLa cell organelles." Journal of Pharmacy and Pharmacology (2017).

  11. Mahdi, A., Omid Haji Maghsoudi, S. Kaveh, R. H. Hamid, K. A. Alireza, and T. Alireza. "Detection of small bowel tumor in wireless capsule endoscopy images using an adaptive neuro-fuzzy inference system." Journal of Biomedical research (2017).

  12. Omid Haji Maghsoudi, A. Vahedipour Tabrizi, B. Robertson, P. Shamble, and A. Spence. "A rodent paw tracker using support vector machine." IEEE Symposium on Signal Processing in Medicine and Biology (SPMB), pp. 1-3. IEEE, 2016.

  13. Omid Haji Maghsoudi, M. Alizadeh, and M. Mirmomen. "A computer aided method to detect bleeding, tumor, and disease regions in Wireless Capsule Endoscopy." IEEE Symposium on Signal Processing in Medicine and Biology (SPMB), pp. 1-6. IEEE, 2016.

  14. A., Mahdi, K. Sharzehi, A. Talebpour, H. Soltanian-Zadeh, H. Eskandari, and Omid Haji Maghsoudi. "Detection of uninformative regions in wireless capsule endoscopy images." 41st Annual Northeaston Biomedical Engineering Conference (NEBEC), pp. 1-2. IEEE, 2015.

  15. Omid Haji Maghsoudi, A. Vahedipour Tabrizi, B. Robertson, P. Shamble, and A. Spence. "A novel automatic method to track the body and paws of running mice in high speed video." IEEESymposium in Signal Processing on Medicine and Biology (SPMB), pp. 1-2. IEEE, 2015.

  16. M. Alizadeh, H. Soltanian Zadeh, and Omid Haji Maghsoudi. "Segmentation of small bowel tumors in wireless capsule endoscopy using level set method." IEEE 27th International Symposium on Computer-Based Medical Systems (CBMS), 2014 pp. 562-563. IEEE, 2014.

  17. Omid Haji Maghsoudi, A. Talebpour, H. Soltanian-Zadeh, M. Alizadeh, and H. Asl Soleimani. "Informative and uninformative regions detection in wce frames." Journal of Advanced Computing 3, no. 1 (2014): 12-34.

  18. Omid Haji Maghsoudiand H. Soltanian-Zadeh. "Detection of abnormalities in wireless capsule endoscopy frames using local fuzzy patterns." 20th Iranian Conference on Biomedical Engineering (ICBME), pp. 286-291. IEEE, 2013.

  19. Omid Haji Maghsoudi, A. Talebpour, H. Soltanian-zadeh, and Hossein Asl Soleimani. "Automatic informative tissue's discriminators in WCE." IEEE International Conference on Imaging Systems and Techniques (IST), pp. 18-23. IEEE, 2012.

  20. Omid Haji Maghsoudi, Alireza Talebpour, H. Soltanian-Zadeh, and N. Haji-maghsoodi. "Automatic organs' detection in WCE." 16th CSI International Symposium on Artificial Intelligence and Signal Processing (AISP), pp. 116-121. IEEE, 2012.

  21. Omid Haji Maghsoudi, A. Talebpour, H. Soltanian-Zadeh, and N. Haji-Maghsoodi. "Segmentation of Crohn, Lymphangiectasia, Xanthoma, Lymphoid Hyperplasia and Stenosis diseases in WCE." Quality of Life Through Quality of Information: Proceedings of MIE2012, 180 (2012): 143.

Under Review Papers

  1. Omid Haji Maghsoudi, A. Vahedipour, A. Spence. “Python-based software for robust markerless tracking of rodent paws in 3D.” Submitted to the Journal of IEEE Access, July 2018.

  2. Omid Haji Maghsoudi, A. Spence. “Treadmill training effect on kinematics: an aging study in rats.” Submitted to the Journal of Medical and Biological Engineering, December 2018.

  3. Y. Tang, Y. Chi, Omid Haji Maghsoudi, J. Yin. “Spined hybrid soft robot for high speed, high force, tunable bistability, and wide-range stiffness modulation.” Submitted to the Journal of Science Robotics,October 2018. Available on arXiv preprint arXiv:1810.08571.

  4. D. Higgin, A. Krupka, Omid Haji Maghsoudi, A. Klishko, B. Prilutsky, M. Lemay. “Adaptation to Slope in Locomotor Trained Spinal Cats with Intact and Self-Reinnervated Lateral Gastrocnemius and Soleus Muscles.” Submitted to the Journal of Neurophysiology, January 2019.

  5. Z. Khashei Varnamkhasti, B. Konh, Omid Haji Maghsoudi, Yan Yu, Lydia Liao. “Ultrasound needle tracking inside a soft phantom and methods to improve the needle tip visualization.” Accepted in conference of Design of Medical Devices, 2019.

  6. Omid Haji Maghsoudi. “Superpixels based segmentation and SVM based classification method to distinguish five diseases from normal regions in wireless capsule endoscopy.” arXiv preprint arXiv:1802.02232, 2018.

  7. Omid Haji Maghsoudi,M. Alizadeh. “Superpixels based segmentation and SVM based classification method to distinguish five diseases from normal regions in wireless capsule endoscopy.” arXiv preprint arXiv:1711.06616, 2017.

 

 

 

 

 

 

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